the strenght of annotations is in the fact that they can refer to precompiled molecular queries/selectors so one can tag arbitrary groupings/arrangements of entities(atoms, chains, domains, subsets, pairs thereof etc.) either in cartesian space or across state space or both.
- red text to mark lines
- remove all shit about bonds from everywhere.
- include the reason mmcif does not include bonds in the core and why it is a sane choice
Images for Joao
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LLM/refactoring per max
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Abstract
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Poster
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Transport
things to pull in(as well as their citations):
- levy paper (diffusion steering?)
- crystal boltz
- wankowitz/bonomi perspective’s citations